Simulation of Laisk_2009
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SBML download
Back<?xml version="1.0" encoding="utf-8"?>
<sbml xmlns="http://www.sbml.org/sbml/level2/version4" level="2" version="4">
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<species id="P913" name="OP" compartment="CXX"/>
<species id="P889" name="OPATP" compartment="CXX"/>
<species id="P916" name="OPc" compartment="CXX"/>
<species id="P132" name="OPT" compartment="CXX"/>
<species id="P479" name="OPTc" compartment="CXX"/>
<species id="P873" name="Owc" compartment="CXX"/>
<species id="P881" name="OXA" compartment="CXX"/>
<species id="P845" name="P700" compartment="CXX"/>
<species id="P843" name="P700_" compartment="CXX"/>
<species id="P849" name="par10" compartment="CXX"/>
<species id="P850" name="par11" compartment="CXX"/>
<species id="P851" name="par12" compartment="CXX"/>
<species id="P831" name="par4" compartment="CXX"/>
<species id="P832" name="par5" compartment="CXX"/>
<species id="P833" name="par6" compartment="CXX"/>
<species id="P840" name="par7" compartment="CXX"/>
<species id="P841" name="par8" compartment="CXX"/>
<species id="P842" name="par9" compartment="CXX"/>
<species id="P836" name="PCf" compartment="CXX"/>
<species id="P829" name="PCfT" compartment="CXX"/>
<species id="P834" name="PCf_" compartment="CXX"/>
<species id="P846" name="PCp" compartment="CXX"/>
<species id="P847" name="PCpP700" compartment="CXX"/>
<species id="P839" name="PCpP700T" compartment="CXX"/>
<species id="P844" name="PCp_" compartment="CXX"/>
<species id="P472" name="PCT" compartment="CXX"/>
<species id="P811" name="PQ" compartment="CXX"/>
<species id="P470" name="PQT" compartment="CXX"/>
<species id="P469" name="PS1T" compartment="CXX"/>
<species id="P819" name="PS2A" compartment="CXX"/>
<species id="P818" name="PS2A_" compartment="CXX"/>
<species id="P468" name="PS2T" compartment="CXX"/>
<species id="P454" name="PSU1" compartment="CXX"/>
<species id="P455" name="PSU2" compartment="CXX"/>
<species id="P828" name="QH" compartment="CXX"/>
<species id="P857" name="RFd" compartment="CXX"/>
<species id="P856" name="RFd_" compartment="CXX"/>
<species id="P903" name="Ri5P" compartment="CXX"/>
<species id="P902" name="Ru5P" compartment="CXX"/>
<species id="P519" name="SUM1" compartment="CXX"/>
<species id="P579" name="SUM10" compartment="CXX"/>
<species id="P586" name="SUM11" compartment="CXX"/>
<species id="P592" name="SUM12" compartment="CXX"/>
<species id="P598" name="SUM13" compartment="CXX"/>
<species id="P604" name="SUM14" compartment="CXX"/>
<species id="P610" name="SUM15" compartment="CXX"/>
<species id="P616" name="SUM16" compartment="CXX"/>
<species id="P622" name="SUM17" compartment="CXX"/>
<species id="P628" name="SUM18" compartment="CXX"/>
<species id="P634" name="SUM19" compartment="CXX"/>
<species id="P527" name="SUM2" compartment="CXX"/>
<species id="P640" name="SUM20" compartment="CXX"/>
<species id="P646" name="SUM21" compartment="CXX"/>
<species id="P652" name="SUM22" compartment="CXX"/>
<species id="P658" name="SUM23" compartment="CXX"/>
<species id="P664" name="SUM24" compartment="CXX"/>
<species id="P670" name="SUM25" compartment="CXX"/>
<species id="P676" name="SUM26" compartment="CXX"/>
<species id="P682" name="SUM27" compartment="CXX"/>
<species id="P537" name="SUM3" compartment="CXX"/>
<species id="P543" name="SUM4" compartment="CXX"/>
<species id="P549" name="SUM5" compartment="CXX"/>
<species id="P555" name="SUM6" compartment="CXX"/>
<species id="P561" name="SUM7" compartment="CXX"/>
<species id="P567" name="SUM8" compartment="CXX"/>
<species id="P573" name="SUM9" compartment="CXX"/>
<species id="P860" name="T810" compartment="CXX"/>
<species id="P861" name="T950" compartment="CXX"/>
<species id="P444" name="TKalv" compartment="CXX"/>
<species id="P969" name="TRf" compartment="CXX"/>
<species id="P970" name="TRm" compartment="CXX"/>
<species id="P907" name="UDPc" compartment="CXX"/>
<species id="P480" name="UDTc" compartment="CXX"/>
<species id="P905" name="UTPc" compartment="CXX"/>
<species id="P931" name="V1" compartment="CXX"/>
<species id="P944" name="V10" compartment="CXX"/>
<species id="P895" name="V12" compartment="CXX"/>
<species id="P871" name="V141" compartment="CXX"/>
<species id="P872" name="V142" compartment="CXX"/>
<species id="P875" name="V146" compartment="CXX"/>
<species id="P946" name="V19" compartment="CXX"/>
<species id="P947" name="V20" compartment="CXX"/>
<species id="P957" name="V23" compartment="CXX"/>
<species id="P959" name="V24" compartment="CXX"/>
<species id="P960" name="V27" compartment="CXX"/>
<species id="P965" name="V28" compartment="CXX"/>
<species id="P966" name="V29" compartment="CXX"/>
<species id="P933" name="V3" compartment="CXX"/>
<species id="P967" name="V31" compartment="CXX"/>
<species id="P968" name="V32" compartment="CXX"/>
<species id="P935" name="V4" compartment="CXX"/>
<species id="P868" name="V40e" compartment="CXX"/>
<species id="P867" name="V40pc" compartment="CXX"/>
<species id="P866" name="V42" compartment="CXX"/>
<species id="P862" name="V44" compartment="CXX"/>
<species id="P863" name="V45" compartment="CXX"/>
<species id="P874" name="V46" compartment="CXX"/>
<species id="P876" name="V49" compartment="CXX"/>
<species id="P938" name="V5" compartment="CXX"/>
<species id="P940" name="V6" compartment="CXX"/>
<species id="P956" name="V60" compartment="CXX"/>
<species id="P878" name="V61" compartment="CXX"/>
<species id="P879" name="V62" compartment="CXX"/>
<species id="P926" name="V63" compartment="CXX"/>
<species id="P886" name="V64" compartment="CXX"/>
<species id="P887" name="V65" compartment="CXX"/>
<species id="P880" name="V66" compartment="CXX"/>
<species id="P941" name="V7" compartment="CXX"/>
<species id="P942" name="V8" compartment="CXX"/>
<species id="P943" name="V9" compartment="CXX"/>
<species id="P923" name="Vc" compartment="CXX"/>
<species id="P453" name="Vcy" compartment="CXX"/>
<species id="P452" name="Vlu" compartment="CXX"/>
<species id="P461" name="Vm0" compartment="CXX"/>
<species id="P481" name="Vm1" compartment="CXX"/>
<species id="P490" name="Vm10" compartment="CXX"/>
<species id="P491" name="Vm11" compartment="CXX"/>
<species id="P492" name="Vm12" compartment="CXX"/>
<species id="P505" name="Vm141" compartment="CXX"/>
<species id="P506" name="Vm142" compartment="CXX"/>
<species id="P507" name="Vm146" compartment="CXX"/>
<species id="P493" name="Vm19" compartment="CXX"/>
<species id="P945" name="Vm19a" compartment="CXX"/>
<species id="P494" name="Vm20" compartment="CXX"/>
<species id="P495" name="Vm21" compartment="CXX"/>
<species id="P496" name="Vm23" compartment="CXX"/>
<species id="P497" name="Vm24" compartment="CXX"/>
<species id="P498" name="Vm27" compartment="CXX"/>
<species id="P499" name="Vm28" compartment="CXX"/>
<species id="P500" name="Vm29" compartment="CXX"/>
<species id="P483" name="Vm3" compartment="CXX"/>
<species id="P501" name="Vm31" compartment="CXX"/>
<species id="P502" name="Vm32" compartment="CXX"/>
<species id="P484" name="Vm4" compartment="CXX"/>
<species id="P503" name="Vm42" compartment="CXX"/>
<species id="P504" name="Vm46" compartment="CXX"/>
<species id="P487" name="Vm6" compartment="CXX"/>
<species id="P508" name="Vm60" compartment="CXX"/>
<species id="P509" name="Vm61" compartment="CXX"/>
<species id="P510" name="Vm62" compartment="CXX"/>
<species id="P511" name="Vm63" compartment="CXX"/>
<species id="P512" name="Vm64" compartment="CXX"/>
<species id="P513" name="Vm65" compartment="CXX"/>
<species id="P514" name="Vm66" compartment="CXX"/>
<species id="P488" name="Vm7" compartment="CXX"/>
<species id="P489" name="Vm9" compartment="CXX"/>
<species id="P128" name="Vme" compartment="CXX"/>
<species id="P485" name="Vm_5" compartment="CXX"/>
<species id="P486" name="Vm_8" compartment="CXX"/>
<species id="P924" name="Vo" compartment="CXX"/>
<species id="P953" name="VOPin" compartment="CXX"/>
<species id="P955" name="VPGAout" compartment="CXX"/>
<species id="P130" name="Vst" compartment="CXX"/>
<species id="P954" name="VT3Pout" compartment="CXX"/>
<species id="P904" name="Xu5P" compartment="CXX"/>
</listOfSpecies>
<listOfParameters>
<parameter id="P139" name="Achl" value="36200"/>
<parameter id="P143" name="ADTcs" value="0.00002"/>
<parameter id="P134" name="ADTs" value="0.00001"/>
<parameter id="P145" name="Arev" value="0"/>
<parameter id="P146" name="ATPc" value="0.0009652"/>
<parameter id="P411" name="a_" value="2.3025851"/>
<parameter id="P148" name="BFHt" value="0.003"/>
<parameter id="P147" name="BF_t" value="0.04"/>
<parameter id="P138" name="Ca" value="0.00034"/>
<parameter id="P150" name="Cchl1" value="0.5"/>
<parameter id="P151" name="Cchl2" value="0.47"/>
<parameter id="P152" name="Ccy" value="8"/>
<parameter id="P126" name="Chl" value="0.00055"/>
<parameter id="P153" name="Clu" value="1"/>
<parameter id="P129" name="Cst" value="8"/>
<parameter id="P127" name="Cvme" value="4"/>
<parameter id="P154" name="CytfTs" value="0.0000015"/>
<parameter id="P155" name="ECytf" value="0.27"/>
<parameter id="P156" name="Eenf" value="-0.32"/>
<parameter id="P157" name="Eenm" value="-0.33"/>
<parameter id="P158" name="EFd" value="-0.38"/>
<parameter id="P159" name="EFeS" value="-0.4"/>
<parameter id="P160" name="ENAD" value="-0.34"/>
<parameter id="P161" name="ENADP" value="-0.34"/>
<parameter id="P162" name="ENfT" value="0.001"/>
<parameter id="P163" name="ENmT" value="0.001"/>
<parameter id="P164" name="EP700" value="0.365"/>
<parameter id="P165" name="EPC" value="0.295"/>
<parameter id="P166" name="EPQ" value="0"/>
<parameter id="P167" name="EQa" value="-0.05"/>
<parameter id="P168" name="Etrf" value="-0.34"/>
<parameter id="P169" name="Etrm" value="-0.34"/>
<parameter id="P413" name="e_" value="1.6022e-19"/>
<parameter id="P170" name="F0" value="0.16"/>
<parameter id="P171" name="FarRed" value="0"/>
<parameter id="P172" name="FdTs" value="0.000015"/>
<parameter id="P173" name="Fm" value="0.25"/>
<parameter id="P174" name="Fmd" value="1"/>
<parameter id="P175" name="Fmdi" value="0.8"/>
<parameter id="P176" name="G0" value="-8"/>
<parameter id="P177" name="G1" value="3"/>
<parameter id="P185" name="G10" value="-5"/>
<parameter id="P186" name="G12" value="7.3"/>
<parameter id="P187" name="G13" value="-1.8"/>
<parameter id="P188" name="G14" value="-0.42"/>
<parameter id="P189" name="G15" value="0.4"/>
<parameter id="P190" name="G16" value="1.7"/>
<parameter id="P191" name="G17" value="0.64"/>
<parameter id="P192" name="G18" value="-0.13"/>
<parameter id="P193" name="G19" value="1.6"/>
<parameter id="P194" name="G20" value="-8"/>
<parameter id="P195" name="G21" value="1.8"/>
<parameter id="P196" name="G23" value="-5.5"/>
<parameter id="P197" name="G24" value="-4"/>
<parameter id="P198" name="G25" value="0.4"/>
<parameter id="P199" name="G26" value="1.7"/>
<parameter id="P200" name="G27" value="0.71"/>
<parameter id="P201" name="G28" value="-0.29"/>
<parameter id="P202" name="G29" value="-3.3"/>
<parameter id="P178" name="G3" value="-5.5"/>
<parameter id="P203" name="G30" value="-3"/>
<parameter id="P179" name="G4" value="-4"/>
<parameter id="P180" name="G5" value="1.4"/>
<parameter id="P181" name="G6" value="-5.5"/>
<parameter id="P204" name="G61" value="1.1"/>
<parameter id="P205" name="G62" value="0.4"/>
<parameter id="P206" name="G63" value="-7.63"/>
<parameter id="P207" name="G64" value="-5"/>
<parameter id="P208" name="G66" value="-1"/>
<parameter id="P182" name="G7" value="-4"/>
<parameter id="P183" name="G8" value="0.1"/>
<parameter id="P184" name="G9" value="-5.2"/>
<parameter id="P209" name="HER" value="2"/>
<parameter id="P210" name="HPR" value="4"/>
<parameter id="P810" name="j2r" value="0"/>
<parameter id="P217" name="k1" value="50000"/>
<parameter id="P218" name="Ka19PGA" value="0.012"/>
<parameter id="P219" name="kA4" value="3"/>
<parameter id="P220" name="kA7" value="3"/>
<parameter id="P221" name="kA9" value="5"/>
<parameter id="P222" name="KBt" value="0.000001"/>
<parameter id="P223" name="kcat" value="3"/>
<parameter id="P224" name="Ki19OP" value="0.003"/>
<parameter id="P225" name="Ki24F26BP" value="0.000001"/>
<parameter id="P226" name="Ki28OP" value="0.0015"/>
<parameter id="P227" name="Ki31T3P" value="0.0015"/>
<parameter id="P228" name="Ki32HeP" value="0.0001"/>
<parameter id="P229" name="Ki32OP" value="0.001"/>
<parameter id="P230" name="Km024FBP" value="0.00002"/>
<parameter id="P231" name="Km028F6P" value="0.00026"/>
<parameter id="P232" name="Km0CO2" value="0.00001"/>
<parameter id="P233" name="Km10ADP" value="0.001"/>
<parameter id="P234" name="Km10ATP" value="0.0001"/>
<parameter id="P235" name="Km10F6P" value="0.0003"/>
<parameter id="P236" name="Km10FBP" value="0.001"/>
<parameter id="P237" name="Km11OP" value="0.00009"/>
<parameter id="P238" name="Km11PGA" value="0.00009"/>
<parameter id="P239" name="Km11T3P" value="0.00009"/>
<parameter id="P240" name="Km12ADP" value="0.0003"/>
<parameter id="P241" name="Km12ATP" value="0.000001447"/>
<parameter id="P242" name="Km12OP" value="0.0003"/>
<parameter id="P244" name="Km141Fd" value="0.001"/>
<parameter id="P243" name="Km141Fd_" value="0.0001"/>
<parameter id="P245" name="Km141NADP" value="0.001"/>
<parameter id="P246" name="Km141NADPH" value="0.0005"/>
<parameter id="P255" name="Km142Cytf" value="0.001"/>
<parameter id="P247" name="Km142Cytf_" value="0.001"/>
<parameter id="P249" name="Km142Fd" value="0.001"/>
<parameter id="P248" name="Km142Fd_" value="0.0002"/>
<parameter id="P250" name="Km146Owc" value="0.000003"/>
<parameter id="P251" name="Km19ADPGlu" value="0.0005"/>
<parameter id="P252" name="Km19ATP" value="0.0001"/>
<parameter id="P253" name="Km19G1P" value="0.001"/>
<parameter id="P254" name="Km19OPOP" value="0.0008"/>
<parameter id="P256" name="Km1ADP" value="0.0005"/>
<parameter id="P257" name="Km1ATP" value="0.0003"/>
<parameter id="P258" name="Km1GAP" value="0.00026"/>
<parameter id="P259" name="Km1OP" value="0.0026"/>
<parameter id="P260" name="Km1PGA" value="0.001"/>
<parameter id="P261" name="Km20ADP" value="0.0006"/>
<parameter id="P263" name="Km20ADPGlu" value="0.0002"/>
<parameter id="P264" name="Km21ADP" value="0.0005"/>
<parameter id="P265" name="Km21ATP" value="0.0003"/>
<parameter id="P266" name="Km21GAP" value="0.00026"/>
<parameter id="P267" name="Km21OP" value="0.0026"/>
<parameter id="P268" name="Km21PGA" value="0.001"/>
<parameter id="P269" name="Km23DHAP" value="0.00035"/>
<parameter id="P270" name="Km23FBP" value="0.000019"/>
<parameter id="P272" name="Km23GAP" value="0.00026"/>
<parameter id="P273" name="Km24F6P" value="0.000061"/>
<parameter id="P274" name="Km24OP" value="0.0017"/>
<parameter id="P275" name="Km27G1P" value="0.00003"/>
<parameter id="P276" name="Km27OPOP" value="0.00003"/>
<parameter id="P277" name="Km27UDPGlu" value="0.00013"/>
<parameter id="P278" name="Km27UTP" value="0.0002"/>
<parameter id="P279" name="Km28SUCP" value="0.00035"/>
<parameter id="P280" name="Km28UDP" value="0.00058"/>
<parameter id="P281" name="Km28UDPGlu" value="0.0001"/>
<parameter id="P282" name="Km29OP" value="0.002"/>
<parameter id="P283" name="Km29SUC" value="0.01"/>
<parameter id="P284" name="Km29SUCP" value="0.00005"/>
<parameter id="P285" name="Km31F6P" value="0.001"/>
<parameter id="P286" name="Km31OP" value="0.001"/>
<parameter id="P287" name="Km32F26BP" value="0.000000001"/>
<parameter id="P288" name="Km32T3P" value="0.002"/>
<parameter id="P289" name="Km3DHAP" value="0.00035"/>
<parameter id="P290" name="Km3FBP" value="0.000019"/>
<parameter id="P291" name="Km3GAP" value="0.00026"/>
<parameter id="P293" name="Km42Cytf" value="0.0001"/>
<parameter id="P292" name="Km42Cytf_" value="0.0005"/>
<parameter id="P294" name="Km42PQ" value="0.002"/>
<parameter id="P311" name="Km42PQ_" value="0.001"/>
<parameter id="P295" name="km45NADP_del" value="0.000001"/>
<parameter id="P877" name="Km46NADP" value="0.000001"/>
<parameter id="P296" name="Km46NADPH" value="0.000001"/>
<parameter id="P298" name="Km46PQ" value="0.000001"/>
<parameter id="P297" name="Km46PQ_" value="0.000001"/>
<parameter id="P299" name="Km4F6P" value="0.000061"/>
<parameter id="P300" name="Km4FBP" value="0.000031"/>
<parameter id="P301" name="Km4OP" value="0.0017"/>
<parameter id="P302" name="Km5GAP" value="0.00026"/>
<parameter id="P303" name="Km5P5P" value="0.00059"/>
<parameter id="P304" name="Km60ATP" value="0.000005"/>
<parameter id="P305" name="Km61P2GA" value="0.0001"/>
<parameter id="P306" name="Km61P3GA" value="0.001"/>
<parameter id="P307" name="Km62P2GA" value="0.0003"/>
<parameter id="P308" name="Km62PEP" value="0.0001"/>
<parameter id="P309" name="Km63CO2" value="0.000002"/>
<parameter id="P310" name="Km63OXA" value="0.0005"/>
<parameter id="P312" name="Km63PEP" value="0.0001"/>
<parameter id="P313" name="Km64MAL" value="0.001"/>
<parameter id="P314" name="Km64NADP" value="0.001"/>
<parameter id="P315" name="Km64NADPH" value="0.00015"/>
<parameter id="P316" name="Km64OXA" value="0.00005"/>
<parameter id="P317" name="Km65Fd_" value="0.003"/>
<parameter id="P318" name="Km65PYR" value="0.00001"/>
<parameter id="P319" name="Km66PEP" value="0.0001"/>
<parameter id="P320" name="Km66PYR" value="0.0001"/>
<parameter id="P321" name="Km6DHAP" value="0.00035"/>
<parameter id="P322" name="Km6E4P" value="0.00017"/>
<parameter id="P323" name="Km6SBP" value="0.000019"/>
<parameter id="P324" name="Km7OP" value="0.0064"/>
<parameter id="P325" name="Km7S7P" value="0.000015"/>
<parameter id="P326" name="Km7SBP" value="0.000012"/>
<parameter id="P327" name="Km8F6P" value="0.00052"/>
<parameter id="P328" name="Km8GAP" value="0.000087"/>
<parameter id="P329" name="Km8P5P" value="0.00011"/>
<parameter id="P330" name="Km8S7P" value="0.00017"/>
<parameter id="P331" name="Km9ADP" value="0.000086"/>
<parameter id="P332" name="Km9ATP" value="0.0005"/>
<parameter id="P333" name="Km9Ru5P" value="0.000035"/>
<parameter id="P334" name="Km9RuBP" value="0.000094"/>
<parameter id="P335" name="Ksp" value="99"/>
<parameter id="P336" name="Kx28OP" value="0.0084"/>
<parameter id="P412" name="k_" value="1.3807e-23"/>
<parameter id="P211" name="k_1" value="0.9"/>
<parameter id="P212" name="k_2" value="0"/>
<parameter id="P213" name="k_4" value="0"/>
<parameter id="P214" name="k_5" value="70000"/>
<parameter id="P215" name="k_6" value="0"/>
<parameter id="P216" name="k_7" value="0"/>
<parameter id="P337" name="Labs" value="0.87"/>
<parameter id="P338" name="MALc" value="0.0005"/>
<parameter id="P339" name="n2r" value="700"/>
<parameter id="P414" name="Na" value="6.022e23"/>
<parameter id="P340" name="NADH" value="0.0001"/>
<parameter id="P341" name="NADPTs" value="0.00002"/>
<parameter id="P342" name="NADTs" value="0.00002"/>
<parameter id="P343" name="Oa" value="0.21"/>
<parameter id="P344" name="OPOP" value="0.000001"/>
<parameter id="P345" name="OPOPc" value="0.00004"/>
<parameter id="P346" name="OPTcs" value="0.0003"/>
<parameter id="P131" name="OPTs" value="0.0005"/>
<parameter id="P348" name="Patm" value="96440"/>
<parameter id="P349" name="PCTs" value="0.000003567"/>
<parameter id="P137" name="PFD" value="0.002276"/>
<parameter id="P350" name="pHc" value="7.8"/>
<parameter id="P351" name="pHs" value="8.05"/>
<parameter id="P440" name="pK1ADPGlu" value="3.93"/>
<parameter id="P430" name="pK1AMP" value="3.74"/>
<parameter id="P424" name="pK1PGA" value="1.42"/>
<parameter id="P418" name="pK2ADP" value="3.93"/>
<parameter id="P441" name="pK2ADPGlu" value="6.83"/>
<parameter id="P431" name="pK2AMP" value="6.45"/>
<parameter id="P427" name="pK2MP" value="6.65"/>
<parameter id="P422" name="pK2OP" value="6.78"/>
<parameter id="P425" name="pK2PGA" value="3.42"/>
<parameter id="P419" name="pK3ADP" value="6.83"/>
<parameter id="P420" name="pK3ATP" value="4.06"/>
<parameter id="P428" name="pK3BP" value="6.02"/>
<parameter id="P423" name="pK3OP" value="12.4"/>
<parameter id="P438" name="pK3OPOP" value="6.7"/>
<parameter id="P426" name="pK3PGA" value="7.1"/>
<parameter id="P352" name="pK42" value="5.2"/>
<parameter id="P421" name="pK4ATP" value="7.06"/>
<parameter id="P429" name="pK4BP" value="6.82"/>
<parameter id="P439" name="pK4OPOP" value="9.4"/>
<parameter id="P353" name="pK50" value="5.65"/>
<parameter id="P354" name="PQTs" value="0.000015"/>
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